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GST Refund Application Time Limit: Worked Deadlines for Every Category

Under s.54(1) a refund application must be filed before two years expire from the relevant date. The relevant date is set by Explanation 2 to s.54: ship departure for exported...

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September 30, 2026
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Last updated: October 2026Applies to: FY 2026-27Verified against: Government sources

The GST refund application time limit is two years from the "relevant date". That sentence is easy to quote and easy to get wrong, because the relevant date changes with the type of refund. Below, each category is worked through with dates, so you can see exactly when your last day falls.

How to count the two years

Three counting rules apply to every example below.

  1. Start from the relevant date, not the invoice or year-end. For most categories these are different dates.
  2. Use the due date where the law says "due date". For SEZ supplies and inverted duty, the law uses the due date for furnishing the return under s.39, not the day you actually filed. Filing GSTR-3B late does not buy extra time.
  3. Add back excluded periods. Time from filing an RFD-01 to a deficiency memo (Rule 90(3) proviso) is excluded for the fresh claim.

If you would like the dates checked for a batch of periods at once, our GST refund time limit service prepares a period-by-period deadline sheet.

Deadlines by category: worked examples

All examples are illustrations using a monthly GSTR-3B filer whose return is due on the 20th of the following month.

CategoryRelevant date ruleIllustration: eventLast day to file
Goods exported by sea or air (LUT or with payment)Ship or aircraft leaves IndiaVessel sailed 12 August 202511 August 2027
Goods exported by landGoods pass the frontierCrossed 3 March 20252 March 2027
Goods exported by postDespatch by the Post OfficeDespatched 18 November 202417 November 2026
Services exported, payment after completionReceipt of payment in foreign exchange or permitted INRPayment received 5 March 20254 March 2027
Services exported, advance receivedDate of invoiceInvoice issued 20 January 202519 January 2027
Supplies to SEZDue date of the return for those suppliesJuly 2025 supplies, return due 20 August 202519 August 2027
Deemed exportsDate the supplier's return for those supplies is furnishedReturn filed 18 September 202517 September 2027
Inverted duty accumulationDue date of the return for the period of the claimOctober 2025, return due 20 November 202519 November 2027
Excess tax paid / other casesDate of payment of taxPaid 10 January 20259 January 2027
Refund following an appellate orderCommunication of the orderOrder received 3 February 20262 February 2028
Tax paid under wrong head (s.77)Payment under the correct head (Rule 89(1A))Correct tax paid 15 September 202514 September 2027
Unregistered buyer, cancelled flat or policyDate of the supplier's cancellation letter (Circular 188/20/2022-GST)Letter dated 1 June 202531 May 2027
Excess balance in cash ledgerNo time limitAnyNo deadline

Category notes that change the answer

Exports of goods under LUT. One RFD-01 usually covers a tax period with many shipping bills, but each shipment has its own relevant date. If you file late for a period, the older shipments in that period can be time-barred while the newer ones are not. The officer will restrict the claim to the shipments within limit, so it pays to file each period early. For how the refund itself is computed, see GST refund calculation for export without payment.

Exports with payment of IGST. The shipping bill is itself treated as the refund application under Rule 96, so the two-year question rarely arises for the original claim. It does arise where a withheld claim or a related claim must be pursued separately.

Exports of services. The relevant date is payment, not the invoice, unless you were paid in advance. A service invoiced in 2024 but paid in 2026 has a 2028 deadline.

Deemed exports. Circular 166/22/2021-GST clarified that the date of the return filed by the supplier counts, even when the recipient files the claim.

Inverted duty. Because the date is tied to the return due date for the period, the limit runs month by month. A business that has not filed inverted-duty claims for a while should check which months are nearest to expiry.

What is close to expiry as on 30 September 2026

Illustration, using the monthly due date of the 20th:

  • Inverted-duty accumulation for September 2024 (return due 20 October 2024): last day 19 October 2026.
  • Inverted-duty accumulation for October 2024 (return due 20 November 2024): last day 19 November 2026.
  • Export of goods shipped in October 2024: deadlines fall in October 2026, shipment by shipment.
  • Services paid for in October 2024: deadlines fall in October 2026.

Quarterly (QRMP) filers have different return due dates; use your own due date for the period.

Worked illustration with a deficiency memo

Illustration: A manufacturer's inverted-duty claim for November 2024 (return due 20 December 2024) has a last day of 19 December 2026. It files on 1 December 2026. On 12 December 2026 the officer issues an RFD-03 for a missing statement.

  • Days from filing to deficiency memo: 11.
  • Revised last day for the fresh claim: 19 December 2026 + 11 days = 30 December 2026.
  • The fresh RFD-01 must go in by then, with the missing statement attached.

Without the Rule 90(3) proviso, the fresh claim would have had only seven days.

Need help with deadlines across many periods?

If you have several months of exports or inverted-duty credit waiting, the order in which you file matters. We can list every period's relevant date and last day, and file the ones closest to expiry first. See GST refund time limit support, and use the GST refund calculator to size each claim.

Key takeaways

  • Two years from the relevant date, and the relevant date is category-specific.
  • SEZ and inverted-duty claims count from the return due date, not your actual filing date.
  • Export claims are shipment by shipment inside one RFD-01.
  • A deficiency memo does not eat into your time; the gap is added back.
  • Cash-ledger refunds have no deadline.

Read next

Disclaimer: Positions stated as on 30 September 2026, based on the CGST Act and Rules as amended, the Finance Act 2026, and the ICAI Handbook on Refunds under GST (January 2026). Verify current notifications before filing.

Quick recapKey facts & short answers

Key Facts About GST Refund Application Time

  • Applies in: All states across India, under the relevant central law.
  • Mode: Mostly online via the official government portal.
  • Typical timeline: Ranges from a few days to a few weeks depending on the case.
  • Non-compliance: May attract penalties, interest or late fees.
  • Expert help: TaxClue completes the entire process end to end for you.

What is the time limit for filing a GST refund application?

Two years from the relevant date under s.54(1). The relevant date depends on the refund type, as set out in Explanation 2 to s.54.

Is the time limit counted from the end of the financial year?

No. That was the old rule for inverted-duty refunds before 1 February 2019. Now it is the due date of the return for the period in which the claim arises.

GST Refund Application Time: a key compliance topic in Indian tax and corporate law that businesses and individuals must understand to remain compliant.

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Disclaimer: This article is for general informational purposes only and does not constitute professional tax, legal or financial advice. Laws, rates and due dates change and can vary by individual case — always verify with the relevant government source (e.g. mca.gov.in, incometax.gov.in) or consult a qualified professional before acting. TaxClue accepts no liability for decisions taken based on this content.

People also ask

Questions, answered

Short, direct answers to the 6 questions readers ask most on this topic.

Two years from the relevant date under s.54(1). The relevant date depends on the refund type, as set out in Explanation 2 to s.54.

No. That was the old rule for inverted-duty refunds before 1 February 2019. Now it is the due date of the return for the period in which the claim arises.

Only if the payment was received in advance. Otherwise it is the date of receipt of payment in convertible foreign exchange or in Indian rupees where permitted by the RBI.

Two years from the due date of the GSTR-3B for that month. For a monthly filer, a month's accumulation expires about two years and twenty days after the month ends.

No. Circular 166/22/2021-GST confirms the two-year limit does not apply to excess balance in the electronic cash ledger.

The officer can sanction the portion within limit and reject the time-barred portion after notice and hearing. The rejected ITC is re-credited by PMT-03 once the rejection is final.