GST Health Check
& Compliance Review
Most GST problems are invisible until the department sends a notice. TaxClue's GST Health Check scans your registration, returns, ITC claims, invoices, e-way bills, and annual reconciliation — identifying every risk, gap, and missed opportunity before they become demands.
What Is a GST Health Check?
A GST Health Check is a structured, CA-led review of your GST compliance position across every dimension — not just returns filing. The GST department uses automated data analytics to cross-match your GSTR-1, GSTR-3B, GSTR-2B ITC claims, e-way bills, e-invoices, and annual returns against each other and against third-party Income Tax / TDS data. Any mismatch triggers a scrutiny notice automatically.
A Health Check runs the same comparison the department runs — but before they do. It tells you exactly where your compliance has gaps, which gaps carry financial risk, and what to fix first. The result is a written report with a Red / Amber / Green (RAG) rating on every check-point and a prioritised action plan.
The Department's BIFA Analytics Runs 24/7
The GST department's BIFA (Business Intelligence & Fraud Analytics) system automatically cross-matches your GSTR-1 vs GSTR-3B output tax, GSTR-2B vs GSTR-3B ITC claims, e-way bill data vs GSTR-1 invoices, e-invoice IRNs vs GSTR-1, and your Income Tax / TDS data vs GST turnover. A health check runs every single one of these comparisons — giving you the exact picture the department has of your business, before they act on it.
What TaxClue Reviews in Every Health Check
Pillar 1 — Registration & Profile
GSTIN status, amendments, APOBs, authorised signatory, DSC active, multi-state presence — all operating states have valid GSTINs.
Pillar 2 — Return Filing Compliance
GSTR-1 filing history, GSTR-3B filing history, GSTR-1 vs GSTR-3B mismatch, GSTR-9 / GSTR-9C complete, pending returns, late fees accumulated.
Pillar 3 — ITC Claims & Eligibility
GSTR-2B reconciliation, Sec 17(5) blocked credits, Rule 42/43 reversals, 180-day payment rule, supplier compliance rate, lapsed ITC.
Pillar 4 — Invoice & Output Tax Compliance
E-invoice applicability, HSN/SAC accuracy, tax rate correctness, place of supply determination, credit notes / debit notes, advance receipt tax.
Pillar 5 — E-Way Bill Compliance
EWB vs GSTR-1 match, generation gaps (goods moved without EWB mandatory), rejected/expired EWBs, transporter compliance, IRN-EWB link.
Pillar 6 — Annual Reconciliation
GSTR-1 vs GSTR-3B turnover gap, GSTR-3B vs books, ITC three-way recon (GSTR-3B vs GSTR-9 annually), GSTR-9C reconciliation gaps, DRC payments, unclaimed refunds.
TaxClue's 6-Step Health Check Process
Scoping Call — 30 Minutes
A CA gets on a call to understand your business: industry, turnover, supply types (B2B / B2C / exports / exempt), filing history, and any known issues or received notices. This calibrates which pillars carry the most risk for your specific business profile.
Data Collection — Portal Access or Exports
We collect: GSTR-1 and GSTR-3B filing data (portal access or JSON / Excel exports), GSTR-2B downloads for the review period, e-way bill report, e-invoice report (if applicable), GSTR-9 / 9C if filed, and your purchase register or trial balance for reconciliation. All data is strictly confidential — NDA available on request.
6-Pillar Analysis — 40+ Check-Points
Our CA runs through all 40+ check-points across the six compliance pillars. Each receives a RAG rating: Green (compliant), Amber (attention needed), or Red (risk / demand exposure). Financial impact is quantified for every Red and Amber item — not just flagged.
Risk Quantification
For every Red-rated finding, we calculate worst-case financial exposure: tax payable + 18% interest + applicable penalties. This lets you prioritise — a ₹500 late fee issue is very different from a ₹5 lakh ITC demand risk. The report shows both the issue and its financial consequence clearly.
Written Report Delivery — Within 72 Hours
A structured written report covering: Executive Summary (overall compliance score), findings by pillar (RAG-rated with financial impact), full 40+ check-point list with status, and a prioritised action plan — written to be immediately actionable, not just diagnostic.
CA Debrief & Action Plan Agreement
A CA walks you through the report, explains every finding in plain language, and agrees on a prioritised remediation plan. For high-risk items, TaxClue begins corrections immediately — filing amendments, reversals, or notice responses — as part of the engagement.
Health Check Deliverables
RAG Compliance Score Report
Every check-point rated Red/Amber/Green with single-page executive summary.
Financial Risk Quantification
Worst-case tax demand + interest + penalty for each Red-rated finding.
Prioritised Action Plan
Every finding linked to a specific remediation action with urgency rating.
ITC Reconciliation Workings
Three-way match showing every match, mismatch, and recoverable credit.
E-Invoice / E-Way Bill Gap List
Transactions where e-invoice or e-way bill was missing — dept cross-match output.
CA Debrief Session
30–45 minute call to walk through findings, clarify every item, and agree action plan.
RAG Score Bands
| RAG Rating | What It Means | Action Required |
|---|---|---|
| 🟢 Green — Compliant | No action needed. Continue monitoring. | None — maintain current compliance level |
| 🟡 Amber — Attention Needed | Low financial risk but procedural gaps to close. | Schedule correction within 30 days |
| 🔴 Red — Demand Exposure | Immediate action — tax + interest + penalty at stake. | Fix immediately — high priority |
When Should You Get a GST Health Check?
Why Choose TaxClue?
6-Pillar Framework
Comprehensive — covers registration to annual reconciliation.
Financial Risk Quantified
Not just flagged — actual ₹ exposure calculated for every issue.
72-Hour Delivery
Written report delivered within 72 hours of data collection.
40+ Check-Points
Every compliance dimension covered — nothing missed.
CA Debrief Included
One-on-one call to walk through every finding.
Fully Confidential
All data and findings are strictly confidential. NDA available.
Frequently Asked Questions
Your GST Health Check. 72-Hour Report. Written. Actionable.
6 pillars. 40+ check-points. Red / Amber / Green on every issue. Financial exposure quantified. Action plan prioritised. One call to book.
🔒 Confidential · 4.9★ Google Rating · No Hidden Charges · CA & CS Assisted